Package: squire Type: Package Title: SEIR transmission model of COVID-19 Version: 0.7.1 Authors@R: c( person("OJ", "Watson", email = "o.watson15@imperial.ac.uk", role = c("aut", "cre")), person("Patrick", "Walker", email = "patrick.walker06@imperial.ac.uk", role = c("aut")), person("Charlie", "Whittaker", email = "charles.whittaker16@imperial.ac.uk", role = c("aut")), person("Peter", "Winskill", email = "p.winskill@imperial.ac.uk", role = c("aut")), person("Giovanni", "Charles", email = "giovanni.charles10@imperial.ac.uk", role = c("aut")), person("Imperial College of Science, Technology and Medicine", role = "cph")) Description: An extended model of the SEIR model used in the Imperial College London Report into the global impact of COVID-19 and strategies for mitigation and suppression (https://www.imperial.ac.uk/mrc-global-infectious-disease-analysis/covid-19/report-12-global-impact-covid-19/). Extensions now include healthcare treatment pathways and excess mortality. License: MIT + file LICENSE Encoding: UTF-8 LazyData: true Suggests: testthat (>= 2.1.0), covr, readxl, knitr, odin.js, rmarkdown, mockery RoxygenNote: 7.1.2 Imports: odin (>= 1.2.4), dde (>= 1.0.2), dplyr, tidyr, rlang, furrr, magrittr, purrr, crayon, methods, ggplot2, viridis, coda, mvtnorm, drjacoby Depends: R (>= 3.1.0) VignetteBuilder: knitr Remotes: mrc-ide/dde, mrc-ide/odin, mrc-ide/odin.js, mrc-ide/drjacoby Config/pak/sysreqs: cmake git make libgit2-dev libicu-dev libuv1-dev libssl-dev libx11-dev Repository: https://ncov-ic.r-universe.dev Date/Publication: 2022-09-08 09:14:12 UTC RemoteUrl: https://github.com/mrc-ide/squire RemoteRef: master RemoteSha: 9fd16c495b2e571a309f35745a602a66ebc9dfb7 NeedsCompilation: yes Packaged: 2026-06-14 07:41:13 UTC; root Author: OJ Watson [aut, cre], Patrick Walker [aut], Charlie Whittaker [aut], Peter Winskill [aut], Giovanni Charles [aut], Imperial College of Science, Technology and Medicine [cph] Maintainer: OJ Watson