Package: sircovid
Title: SIR Model for COVID-19
Version: 0.15.1
Authors@R: 
    c(person(given = "Marc",
           family = "Baguelin",
           role = c("aut", "cre"),
           email = "m.baguelin@imperial.ac.uk"),
      person(given = "Sangeeta",
           family = "Bhatia",
           role = c("ctb"),
           email = "s.bathia@imperial.ac.uk"),
      person(given = "Edward",
           family = "Knock",
           role = c("aut"),
           email = "e.knock@imperial.ac.uk"),
      person(given = "Lilith",
           family = "Whittles",
           role = c("aut"),
           email = "l.whittles@imperial.ac.uk"),
      person(given = "Rich",
           family = "FitzJohn",
           role = c("aut"),
           email = "r.fitzjohn@imperial.ac.uk"),
      person(given = "John",
           family = "Lees",
           role = c("aut"),
           email = "j.lees@imperial.ac.uk"),
      person(given = "OJ",
           family = "Watson",
           role = c("ctb"),
           email = "o.watson15@imperial.ac.uk"),
      person(given = "Anne",
           family = "Cori",
           role = c("aut"),
           email = "a.cori@imperial.ac.uk"),
      person(given = "Pablo",
           family = "Perez-Guzman",
           role = c("aut"),
           email = "p.perez-guzman@imperial.ac.uk"),
      person(given = "Raphael",
           family = "Sonabend",
           role = c("aut"),
           email = "r.sonabend@imperial.ac.uk"),
      person(given = "Yasin",
           family = "Elmaci",
           role = c("aut"),
           email = "yasin.elmaci20@imperial.ac.uk"))
Description: Mechanistic models of transmission of the SARS-Cov-2
        (COVID-19) virus implemented as stochastic compartmental models
        in odin and dust. Uses mcstate to perfom Bayesian evidence
        synthesis from several surveillance data streams through the
        estimation of transmission parameters.
License: MIT + file LICENSE
URL: https://github.com/mrc-ide/sircovid, https://mrc-ide.github.io
BugReports: https://github.com/mrc-ide/sircovid/issues
Encoding: UTF-8
Language: en-GB
Depends: R (>= 3.1.0)
Imports: dust (>= 0.15.1), eigen1 (>= 0.1.1), mcstate (>= 0.9.18),
        socialmixr
LinkingTo: cpp11 (>= 0.4.4), dust (>= 0.15.1)
Suggests: EpiEstim, distcrete, mockery, odin (>= 1.5.9), odin.dust (>=
        0.3.9), testthat
RoxygenNote: 7.3.1
Roxygen: list(markdown = TRUE)
SystemRequirements: C++11
Remotes: mrc-ide/dust, mrc-ide/eigen1, mrc-ide/mcstate, mrc-ide/odin,
        mrc-ide/odin.dust
Config/pak/sysreqs: cmake make libicu-dev libuv1-dev libxml2-dev
        libssl-dev
Repository: https://ncov-ic.r-universe.dev
Date/Publication: 2024-06-19 08:41:01 UTC
RemoteUrl: https://github.com/mrc-ide/sircovid
RemoteRef: master
RemoteSha: 5492e5a47e9b973bbec57020fa79c4731acfb56d
NeedsCompilation: yes
Packaged: 2026-06-17 09:10:47 UTC; root
Author: Marc Baguelin [aut, cre],
  Sangeeta Bhatia [ctb],
  Edward Knock [aut],
  Lilith Whittles [aut],
  Rich FitzJohn [aut],
  John Lees [aut],
  OJ Watson [ctb],
  Anne Cori [aut],
  Pablo Perez-Guzman [aut],
  Raphael Sonabend [aut],
  Yasin Elmaci [aut]
Maintainer: Marc Baguelin <m.baguelin@imperial.ac.uk>